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Submissions from 2019

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Culturing Echinoderm Larvae Through Metamorphosis, Jason Hodin, Andreas Hayland, Annie Mercier, Bruno Pernet, David L. Cohen, Jean-Francois Hamel, Jonathan D. Allen, Justin S. McAlister, Maria Byrne, and Sophie B. George

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Development of helical, fish-inspired cross-step filter for collecting harmful algae, Adam Schroeder, Lauren Marshall, Brian Trease, Anna Becker, and S. Laurie Sanderson

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Localization of SUMO-modified Proteins Using Fluorescent Sumo-trapping Proteins, Rui Yin, Catherine Harvey, Diane C. Shakes, and Oliver Kerscher

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Trpm4 Ion Channels in pre-Bo¨tzinger Complex Interneurons Are Essential for Breathing Motor Pattern But Not Rhythm, Marina Cristina D. Picardo, Yae K. Sugimura, Kaitlyn E. Dorst, Prajkta S. Kallurkar, Victoria T. Akins, Xingru Ma, Ryoichi Teruyama, Romaine Guinamard, Kaiwen Kam, Margaret Saha, and Christopher A. Del Negro

Submissions from 2018

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Asexual Reproduction of Marine Invertebrate Embryos and Larvae, Jonathon D. Allen, Adam M. Reitzel, and William Jaeckel

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Biofilm formation and toxin production provide a fitness advantage in mixed colonies of environmental yeast isolates, Bernadette M. Deschaine, Angela R. Heysel, B. Adam Lenhart, and Helen A. Murphy

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Biofilm formation and toxin production provide a fitness advantage in mixed colonies of environmental yeast isolates, Bernadette M. Deschaine, Angela R. Heysel, B. Adam Lenhart, and Helen A. Murphy

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Data Descriptor: High content screen for identifying small-molecule LC3B-localization modulators in a renal cancer cell line, Likhitha Kolla, David S. Heo, Daniel P. Rosenberg, Sara A. Barlow, Anna A. Maximova, Emily E. Cassio, and William J. Buchser

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Data Descriptor: High content screen for identifying small-molecule LC3B-localization modulators in a renal cancer cell line, Likhitha Kolla, David S. Heo, Daniel P. Rosenberg, Sara A. Barlow, Anna A. Maximova, Emily E. Cassio, and William J. Buchser

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Effects of point-count duration on estimated detection probabilities and occupancy of breeding birds, Matthias Leu, Matthew L. Farnsworth, Erica Fleishman, David S. Dobkin, Rick D. Scherer, Barry R. Noon, and Brett G. Dickson

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Filling the BINs of life: Report of an amphibian and reptile survey of the Tanintharyi (Tenasserim) Region of Myanmar, with DNA barcode data, Daniel G. Mulcahy, Justin L. Lee, Aryeh H. Miller, Mia Chand, Myint Kyaw Thura, and George R. Zug

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N-terminal Sumoylation of Centromeric Histone H3 Variant Cse4 Regulates Its Proteolysis To Prevent Mislocalization to Non-centromeric Chromatin, Kentaro Ohkuni, Reuben Levy-Myers, Jack Warren, Wei-Chun Au, Yoshimitsu Takahashi, Richard E. Baker, and Munira A. Basrai

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Physical modeling of vortical cross-step flow in the American paddlefish, Polyodon spathula, Hannah Brooks, Grant Emerson Haines, M. Carly Lin, and S. Laurie Sanderson

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Polygyny does not explain the superior competitive ability of dominant ant associates in the African ant-plant, Acacia (Vachellia) drepanolobium, John H. Boyle, Dino J. Martins, Julianne Pelaez, Paul M. Musili, Staline Kibet, S. Kimani Ndung'u, David Kenfack, and Naomi E. Pierce

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Sex- and Gamete-Specific Patterns of X Chromosome Segregation in a Trioecious Nematode, Sophie Tandonnet, Maureen C. Farrell, Georgios D. Koutsovoulos, Mark L. Blaxter, Manish Parihar, Penny L. Sadler, Diane C. Shakes, and Andre Pires-daSilva

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Shrinking Suburbs in a Time of Crisis, Justin B. Hollander, Colin Polsky, Dan Zinder, and Daniel M. Runfola

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SUMO-Targeted Ubiquitin Ligases (STUbLs) Reduce the Toxicity and Abnormal Transcriptional Activity Associated With a Mutant, Aggregation-Prone Fragment of Huntingtin, Kentaro Ohkuni, Nagesh Pasupala, Jennifer Peek, and Oliver Kerscher

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SUMO targeting of a stress-tolerant Ulp1 SUMO protease, Jennifer Peek, Catherine Harvey, Dreux Gray, and Oliver Kerscher

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SUMO targeting of a stress-tolerant Ulp1 SUMO protease, Jennifer Peek, Catherine Harvey, Dreux Gray, Danny Rosenberg, Likhitha Kolla, Reuben Levy-Myers, Rui Yin, Jonathan L. McMurry, and Oliver Kerscher

Submissions from 2017

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A communal catalogue reveals Earth’s multiscale microbial diversity, L R. Thompson and Daniel A. Cristol

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A Whole-Transcriptome Approach to Evaluating Reference Genes for Quantitative Gene Expression Studies: A Case Study in Mimulus, Kimmy A. Stanton, Patrick P. Edger, Joshua R. Puzey, Taliesin Kinser, Philip Cheng, Daniel M. Vernon, Nancy R. Forsthoefel, and Arielle M. Cooley

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Correlation between investment in sexual traits and valve sexual dimorphism in Cyprideis species (Ostracoda), Maria Joao Fernandes Martins, Gene Hunt, Rowan Lockwood, John P. Swaddle, and David J. Horne

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Cytoskeletal variations in an asymmetric cell division support diversity in nematode sperm size and sex ratios, Ethan S. Winter, Anna Schwarz, Gunar Fabig, Jessica L. Feldman, Andre Pires-daSilva, Thomas Mueller-Reichert, Penny L. Sadler, and Diane C. Shakes

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Effectiveness and Adoption of a Drawing-to-Learn Study Tool for Recall and Problem Solving: Minute Sketches with Folded Lists, Paul D. Heideman, K. Adryan Flores, Lu M. Sevier, and Kelsey E. Trouton

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Estimation of the occupancy of butterflies in diverse biogeographic regions, Erica Fleishman, Rick D. Scherer, Angela Zappalla, and Matthias Leu

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Exposure to dietary mercury alters cognition and behavior of zebra finches, John P. Swaddle, Tessa R. Diehl, Capwell E. Taylor, Aaron S. Fanaee, Jessica L. Benson, Neil R. Huckstep, and Daniel A. Cristol

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Genetic signatures for Helicobacter pylori strains of West African origin, Kennady K. Bullock, Carrie L. Shaffer, Andrew W. Brooks, Ousman Secka, Mark H. Forsyth, Mark S. McClain, and Timothy L. Cover

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Genetic variation and clonal diversity in introduced populations of Mimulus guttatus assessed by genotyping at 62 single nucleotide polymorphism loci, Pauline O. Pantoja, Violeta I. Simon-Porcar, Joshua R. Puzey, and Mario Vallejo-Marin

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Integration of swimming kinematics and ram suspension feeding in a model American paddlefish, Polyodon spathula, Grant Emerson Haines and S. Laurie Sanderson

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Integrative behavioral ecotoxicology: bringing together fields to establish new insight to behavioral ecology, toxicology, and conservation, Elizabeth K. Peterson, David B. Buchwalter, Jacob L. Kerby, Matthew K. LeFauve, ClaireW. Varian-Ramos, and John P. Swaddle

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Known mutator alleles do not markedly increase mutation rate in clinical Saccharomyces cerevisiae strains, Daniel A. Skelly, Paul M. Magwene, Brianna Meeks, and Helen A. Murphy

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Lamin A and microtubules collaborate to maintain nuclear morphology, Zeshan Tariq, Haoyue Zhang, Alexander Chia-Liu, Yang Shen, Yantenew Gete, Zheng-Mei Xiong, Claire Tocheny, Leonard Campanello, Di Wu, Wolfgang Losert, and Kan Cao

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Mapping Bald Eagle Activity Shadows Around Communal Roosts, Bryan D. Watts and Courtney Turrin

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Population structure and local selection yield high genomic variation in Mimulus guttatus, Joshua R. Puzey, John H. Willis, and John K. Kelly

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Subgenome Dominance in an Interspecific Hybrid, Synthetic Allopolyploid, and a 140-Year-Old Naturally Established Neo-Allopolyploid Monkeyflower, Patrick P. Edger, Ronald Smith, Michael R. McKain, Arielle M. Cooley, Mario Vallejo-Marin, Yaowu Yuan, Adam J. Bewick, Lexiang Ji, Adrian E. Platts, Megan J. Bowman, Kevin L. Childs, Jacob D. Washburn, Robert J. Schmitz, Gregory D. Smith, J. Chris Pires, and Joshua R. Puzeyn

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Taking the Health Aid Debate to the Sub-National Level: The Impact and Allocation of Foreign Health Aid in Malawi, Robert Marty, Carrie B. Dolan, Matthias Leu, and Daniel M. Runfola

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Taking the health aid debate to the subnational level: the impact and allocation of foreign health aid in Malawi, Robert Marty, Carrie B. Dolan, Matthias Leu, and Daniel Runfola

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The implications of American chestnut reintroduction on landscape dynamics and carbon storage, Eric J. Gustafson, Arjan de Bruijn, Nathanael Lichti, Douglass F. Jacobs, Brian R. Sturtevant, Jane Foster, Brian R. Miranda, and Harmony J. Dalgleish

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Transcriptome of neonatal preBotzinger complex neurones in Dbx1 reporter mice, John A. Hayes, Andrew Kottick, Maria Cristina D. Picardo, Andrew D. Halleran, Ronald D. Smith, Gregory D. Smith, Margaret S. Saha, and Christopher A. Del Negro

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Variation in Reproductive Success Across Captive Populations: Methodological Differences, Potential Biases and Opportunities, Simon C. Griffith, Ondi L. Crino, Samuel C. Andrew, Fumiaki Y. Nomano, Elizabeth Adkins-Regan, Carlos Alonso-Alvarez, Ida E. Bailey, Stephanie S. Bittner, Peri E. Bolton, Winnie Boner, Neeltje Boogert, Ingrid C. A. Boucaud, Michael Briga, Katherine L. Buchanan, Barbara A. Caspers, Mariusz Cichon, David F. Clayton, Sebastien Deregnaucourt, Wolfgang Forstmeier, Lauren M. Guillette, Ian R. Hartley, Susan D. Healy, Davina L. Hill, John Swaddle, and Claire W. Varian-Ramos

Submissions from 2016

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A Case of Beare-Stevenson Syndrome with Unusual Manifestations, Nitin Ron, Samuel Leung, Karen Laurie David, and Alexis Gerber

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A Sonic Net Excludes Birds from an Airfield: Implications for Reducing Bird Strike and Crop Losses, John P. Swaddle, Dana L. Moseley, Mark H. Hinders, and Elizabeth P. Smith

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A sonic net excludes birds from an airfield: implications for reducing bird strike and crop losses, John P. Swaddle, Dana L. Moseley, Elizabeth P. Smith, and Mark K. Hinders

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Blood Mercury Levels of Zebra Finches Are Heritable: Implications for the Evolution of Mercury Resistance, Kenton A. Buck, Claire W. Varian-Ramos, Daniel A. Cristol, and John P. Swaddle

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Communicative Coping Behavior Checklist: Observation of Persons With Dementia in the Home Environment, Pamela A. Saunders, Julia Ruth, Lauren Latella, and Nicholas Talisman

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Consequences of Shifts in Abundance and Distribution of American Chestnut for Restoration of a Foundation Forest Tree, Harmony J. Dalgleish, C. Dana Nelson, C. Dana Nelson, and John A. Scrivani

Consequences of Shifts in Abundance and Distribution of American Chestnut for Restoration of a Foundation Forest Tree, Harmony J. Dalgleish, C. Dana Nelson, C. Dana Nelson, and John A. Scrivani

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Consequences of Shifts in Abundance and Distribution of American Chestnut for Restoration of a Foundation Forest Tree, Harmony J. Dalgleish, C. Dana Nelson, C. Dana Nelson, and John A. Scrivani

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Contributions of organic and inorganic matter to sediment volume and accretion in tidal wetlands at steady state, Randolph Chambers

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Experimental Exposure to Urban and Pink Noise Affects Brain Development and Song Learning in Zebra Finches (Taenopygia guttata), Dominique A. Potvin, Michael T. Curcio, John P. Swaddle, and Scott A. MacDougall-Shackleton

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Experimental exposure to urban and pink noise affects brain development and song learning in zebra finches (Taenopygia guttata), Dominique A. Potvin, Scott A. MacDougall-Shackleton, Michael T. Curcio, John P. Swaddle, and John P. Swaddle

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Fish introductions and light modulate food web fluxes in tropical streams: a whole-ecosystem experimental approach, Sarah M. Collins, Steven A. Thomas, Thomas Heatherly, Keeley L. MacNeill, Antoine O. H. C. Leduc, Andres Lopez-Sepulcre, Bradley A. Lamphere, Rana W. El-Sabaawi, David N. Reznick, Catherine M. Pringle, and Alexander S. Flecker

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Fish mouths as engineering structures for vortical cross-step filtration, S. Laurie Sanderson, Erin Roberts, Jillian Lineburg, and Hannah Brooks

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Functional Interactions between Mammalian Respiratory Rhythmogenic and Premotor Circuitry, Hanbing Song, John A. Hayes, Nikolas C. Vann, Xueying Wang, Christopher A. Del Negro, and M. Drew LaMar

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Genetic Evolution of a Helicobacter pylori Acid-Sensing Histidine Kinase and Gastric Disease, Uma Krishna, Judith Romero-Gallo, Giovanni Suarez, and Mark H. Forsyth

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Genetic Evolution of a Helicobacter pylori Acid-Sensing Histidine Kinase and Gastric Disease, Uma Krishna, Judith Romero-Gallo, Giovanni Suarez, and Mark H. Forsyth

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Genetic Evolution of a Helicobacter pylori Acid-Sensing Histidine Kinase and Gastric Disease, Uma Krishna, Judith Romero-Gallo, Giovanni Suarez, and Mark H. Forsyth

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Mobilization of mercury from lean tissues during simulated migratory fasting in a model songbird, Chad L. Seewagen, Chad L. Seewagen, Daniel A. Cristol, and Alexander R. Gerson

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Mobilization of mercury from lean tissues during simulated migratory fasting in a model songbird, Chad L. Seewagen, Chad L. Seewagen, Daniel A. Cristol, and Alexander R. Gerson

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Modeling the aggregated exposure and responses of bowhead whales Balaena mysticetus to multiple sources of anthropogenic underwater sound, William T. Ellison, Roberto Racca, Christopher W. Clark, and Matthias Leu

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Modeling the aggregated exposure and responses of bowhead whales Balaena mysticetus to multiple sources of anthropogenic underwater sound, William T. Ellison, Roberto Racca, Christopher W. Clark, and Matthias Leu

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Nuclear import of the thyroid hormone receptor alpha 1 is mediated by importin 7, importin beta 1, and adaptor importin alpha 1, Vincent R. Roggero, Jibo Zhang, Laura E. Parente, Yazdi Doshi, Rose C. Dziedzic, Emma L. McGregor, Arev D. Varjabedian, Sara E. Schad, Lizabeth A. Allison, and Cornelius Bondzi

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Nuclear import of the thyroid hormone receptor alpha 1 is mediated by importin 7, importin beta 1, and adaptor importin alpha 1, Vincent R. Roggero, Jibo Zhang, Laura E. Parente, Yazdi Doshi, Rose C. Dziedzic, Emma L. McGregor, Arev D. Varjabedian, Sara E. Schad, Cornelius Bondzi, and Lizabeth A. Allison

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Separating oil from water: suspension-feeding goldfish ingest liquid vegetable oil, Kristin Edwards, Gary Rice, and S. Laurie Sanderson

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Strongly asymmetric hybridization barriers shape the origin of a new polyploid species and its hybrid ancestor, Mario Vallejo-Marin, Michelle Yuequi Lee, Arielle M. Cooley, and Joshua R. Puzey

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SUMO-targeted ubiquitin ligase (STUbL) Slx5 regulates proteolysis of centromeric histone H3 variant Cse4 and prevents its mislocalization to euchromatin, Kentaro Ohkuni, Yoshimitsu Takahashi, Wei-Chun Au, Nagesh Pasupala, Reuben Levy-Myers, and Oliver Kerscher

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SUMO-targeted ubiquitin ligase (STUbL) Slx5 regulates proteolysis of centromeric histone H3 variant Cse4 and prevents its mislocalization to euchromatin, Kentaro Ohkuni, Yoshimitsu Takahashi, Alyona Flup, Josh La, Wei-Chun Au, Nagesh Pasupala, Ruben Levy-Meyers, Jack Warren, Alexander Strunnikov, Richard E. Baker, Oliver Kerscher, Kerry Bloom, and Munira A. Basrai

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SUMO-targeted ubiquitin ligase (STUbL) Slx5 regulates proteolysis of centromeric histone H3 variant Cse4 and prevents its mislocalization to euchromatin, Kentaro Ohkuni, Yoshimitsu Takahashi, Alyona Fulp, and Oliver Kerscher

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SUMOylation, Oliver Kerscher

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Utilization Probability Map for Migrating Bald Eagles in Northeastern North America: A Tool for Siting Wind Energy Facilities and Other Flight Hazards, Elizabeth K. Mojica, Elizabeth K. Mojica, and Courtney L. Turrin

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Utilization Probability Map for Migrating Bald Eagles in Northeastern North America: A Tool for Siting Wind Energy Facilities and Other Flight Hazards, Elizabeth K. Mojica and Courtney L. Turrin

Submissions from 2015

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Amplification or suppression: Social networks and the climate change-migration association in rural Mexico, Raphael J. Nawrotzki, Fernando Riosmena, Lori M. Hunter, and Daniel M. Runfola

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A Regression-Based Differential Expression Detection Algorithm for Microarray Studies with Ultra-Low Sample Size, Daniel Vasiliu, Samuel Clamons, Molly McDonough, Brian Rabe, and Margaret Saha

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Climate change as migration driver from rural and urban Mexico, Raphael J. Nawrotzki, Lori M. Hunter, Daniel M. Runfola, and Fernando Riosmena

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Control of plant stem cell function by conserved interacting transcriptional regulators, Yun Zhou, Xing Liu, Zachary L. Nimchuk, and Eric M. Engstrom

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Crosstalk between the HpArsRS two-component system and HpNikR is necessary for maximal activation of urease transcription, Beth M. Carpenter, Henan Gancz, Stephanie L. Servetas, Daniel R. Hallinger, and Mark H. Forsyth

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Disrupted seasonal biology impacts health, food security and ecosystems, T. J. Stevenson, M. E. Visser, S. A. M. Martin, and P. Heideman

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Driver knowledge and attitudes on animal vehicle collisions in Northern Tanzania, John Kioko, Christian Kiffner, Payton Phillips, and Claire Patterson-Abrolat

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Drosophila Muller F Elements Maintain a Distinct Set of Genomic Properties Over 40 Million Years of Evolution, Wilson Leung, Christopher D. Shaffer, William Barshop, Matthew Wawersik, and Elizabeth Kiernan

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Eastern Bluebirds Alter their Song in Response to Anthropogenic Changes in the Acoustic Environment, Caitlin R. Kight and John P. Swaddle

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Forward Genetics Identifies a Requirement for the Izumo-like Immunoglobulin Superfamily spe-45 Gene in Caenorhabditis elegans Fertilization, Gunasekaran Singaravelu, Sina Rahimi, Amber Krauchunas, and Diane Shakes

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Genetic variation in male sexual behaviour in a population of white-footed mice in relation to photoperiod, Kathy Sharp, Donna Bucci, Paul K. Zelensky, Alanna Chesney, Wendy Tidhar, Paul D. Heideman, and David R. Broussard

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Mechanisms Leading to Rhythm Cessation in the Respiratory PreBotzinger Complex Due to Piecewise Cumulative Neuronal Deletions, Hanbing Song, John A. Hayes, Nicolas A. Vann, M. Drew LaMar, and Christopher A. Del Negro

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Mucous contribution to gut nutrient content in American gizzard shad Dorosoma cepedianum, L. L. Holley, M K. Heidman, Randolph Chambers, and S. Laurie Sanderson

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Multiple exportins influence thyroid hormone receptor localization, Kelly S. Subramanian, Rose C. Dziedzic, Hallie N. Nelson, Mary E. Stern, Vincent R. Roggero, Cornelius Bondzi, and Lizabeth A. Allison

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Multiple exportins influence thyroid hormone receptor localization, Kelly Sue Subramanian, Rose C. Dziedzic, Hallie N. Nelson, Erin M. Bertrand, John P. McCrow, Ahmed Moustafa, Rachel E. Sipler, Jenna L. Spackeen, and Deborah A. Bronk

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Speciation by genome duplication: Repeated origins and genomic composition of the recently formed allopolyploid species Mimulus peregrinus, Mario Vallejo-Marin, Richard J. A. Buggs, Arielle M. Cooley, and Joshua R. Puzey

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Transcriptomic Characterization of an Infection of Mycobacterium smegmatis by the Cluster A4 Mycobacteriophage Kampy, Andrew Halleran, Samuel Clamons, and Margaret Saha

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Undocumented migration in response to climate change, Raphael J. Nawrotzki, Fernando Riosmena, Lori M. Hunter, and Daniel M. Runfola

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Use of ESI-FTICR-MS to Characterize Dissolved Organic Matter in Headwater Streams Draining Forest-Dominated and Pasture-Dominated Watersheds, Randolph Chambers

Submissions from 2014

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A Broadly Implementable Research Course in Phage Discovery and Genomics for First-Year Undergraduate Students, Tuajuanda C. Jordan, Sandra H. Burnett, Susan Carson, and Margaret S. Saha

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A Central Support System Can Facilitate Implementation and Sustainability of a Classroom-Based Undergraduate Research Experience (CURE) in Genomics, David Lopatto, Charles Hauser, Christopher J. Jones, and Michael J. Wolyniak

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A Course-Based Research Experience: How Benefits Change with Increased Investment in Instructional Time, Christopher D. Shaffer, Wilson Leung, Sarah C. R. Elgin, and Matthew Wawersik

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A critical knowledge pathway to low-carbon, sustainable futures: integrated understanding of urbanization, urban areas and carbon, Patricia Romero-Lankao, Kevin Gurney, Karen Seto, and Daniel M. Runfola

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A SUMO-targeted ubiquitin ligase is involved in the degradation of the nuclear pool of the SUMO E3 ligase Siz1, Jason W. Westerbeck, Nagesh Pasupala, Mark Guillotte, Eva Szymanski, Brooke C. Matson, Cecilia Esteban, and Oliver Kerscher

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A SUMO-targeted ubiquitin ligase is involved in the degradation of the nuclear pool of the SUMO E3 ligase Siz1, Jason W. Westerbeck, Nagesh Pasupala, Mark Guillotte, Eva Szymanski, Brooke C. Matson, Cecilia Esteban, and Oliver Kerscher

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Characterization of tweety gene (ttyh1-3) expression in Xenopus laevis during embryonic development, Andrew D. Halleran, Morgan Sehdev, Brian A. Rabe, Ryan W. Huyck, Cheyenne C. Williams, and Margaret S. Saha

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Creating spatially-explicit lawn maps without classifying remotely-sensed imagery: The case of suburban Boston, Massachusetts, USA, Nicholas M. Giner, Colin Polsky, Robert G. Pontius Jr, Daniel M. Runfola, and Samuel J. Ratick

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Dissection and Downstream Analysis of Zebra Finch Embryos at Early Stages of Development, Jessica R. Murray, Monika E. Stanciauskas, Tejas S. Aralere, and Margaret S. Saha

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Ecological Scale of Bird Community Response to Pinon-Juniper Removal, Steven T. Knick, Steven E. Hanser, M. Leu, and M. Leu