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Theses/Dissertations from 2020

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The Impacts Of Acute Hypoxic Exposure And Other Concomitant Stressors On The Cardiorespiratory Physiology Of Coastal Elasmobranch Fishes, Gail Danielle Schwieterman

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Search for Selection: Genomic, Transcriptomic, and Phenotypic Investigations of Spotted Seatrout (Cynoscion nebulosus), Jingwei Song

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Temporal Variability In Cohesive Sediment Dynamics In A Partially Mixed Estuary, The York River Estuary, Virginia, Usa: A Numerical Study Developed From Observations, Danielle Tarpley

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Environmental Controls On Pteropod Ecology And Physiology Along The Western Antarctic Peninsula, Patricia Susan Thibodeau

Theses/Dissertations from 2019

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Animal Waste and Antibiotic Impacts on Microbial Denitrification in Terrestrial and Aquatic Ecosystems, Miguel Albergaria Furtado Semedo

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Satellites, Seagrass, and Blue Crabs: Understanding Inter-Annual Fluctuations and Linkages in the York River, Kristen Bachand

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Seasonal Variability of the Co2-System Throughout the Chesapeake Bay Mainstem, Jaclyn Rain Friedman

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Human Dimensions of a Participatory, Collaborative Modeling Process - Oysterfutures, Taylor Dawn Goelz

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Unexplored Aspects of the Biotic Filter to Seedling Recruitment in Aquatic Environments, Andrew James Johnson

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The Effect of Vaccination and Host Genetics on Transmission Dynamics of Infectious Hematopoietic Necrosis Virus and Flavobacterium Psychrophilum in Rainbow Trout (Oncorhynchus Mykiss), Darbi Rae Jones

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Fluxes, drivers, and composition of carbon exchanged at the Taskinas Creek, VA coastal marsh creek-estuarine interface, Amanda Knobloch

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Applying the Concept of Thresholds in Ecotoxicology with Focus on the Joint Effects of Habitat Fragmentation and Contamination, Marcos Krull

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An Exploration into the Identification, Etiology, and Distribution of Idiopathic Blindness in the American Lobster, Homarus Americanus, Addison T. Ochs

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Impacts of Physical Transport on Estuarine Phytoplankton Dynamics and Harmful Algal Blooms, Qubin Qin

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Fecundity of Triploid Eastern Oyster (Crassostrea virginica) as a Function of Tetraploid Lineage, Kate Ritter

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Impacts of Margalefidinium polykrikoides and Alexandrium monilatum on Oysters Cultured in Lower Chesapeake Bay, Clara L. Robison

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Partitioning of Hydrophobic Organic Contaminants and Microbial Communities on Microplastics, Kelley Ann Uhlig

Theses/Dissertations from 2018

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Improving Stock Assessments and Management Advice for Bluefin Tunas and Other Highly Migratory Species, Lisa Elma Ailloud

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The Eastern Oyster Microbiome and its Implications in the Marine Nitrogen Cycle, Ann Arfken

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Impact of Submerged Aquatic Vegetation on Water Quality in Cache Slough Complex, Sacramento-San Joaquin Delta: a Numerical Modeling Study, Xun Cai

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Impacts of Atmospheric Nitrogen Deposition and Coastal Nitrogen Fluxes on Chesapeake Bay Hypoxia, Fei Da

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Characterizing the Biological Impacts and Human Dimensions of the U.S. East Coast Recreational Atlantic Bluefin Tuna Fishery, William Morris Goldsmith

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Reproductive Investment in Crassostrea Virginica as an Indicator of a Tolerance Response to Perkinsus Marinus, Lauren Irene Huey

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Shifting Patterns of Ribbed Mussel Distribution and Ecosystem Services in Response to Sea Level Rise, Robert Earl Isdell

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Movements, Habitat Utilization, and Post-Release Survival of Cobia (Rachycentron Canadum) That Summer in Virginia Waters Determined Using Pop-Up Satellite Archival Tags (Psats), Douglas Jensen

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Beach-Ridge Sedimentology as an Archive of Terrestrial Climate Change: Insights From Geochemical and Stratigraphic Study of the Tijucas Strandplain, Southern Brazil, Julie Lauren Krask

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Development of Large-Scale Unstructured Grid Storm Surge and Sub-Grid Inundation Models for Coastal Applications, Zhuo Liu

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Evaluation of Population Structure and the Interspecific Relationship of Striped Marlin (Kajikia Audax) and White Marlin (K. Albida) Based on Traditional or Genome-Wide Molecular Markers, Nadya Mamoozadeh

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Individual- and Population-Level Effects of Temperature and Hypoxia on Two Demersal Fishes in Chesapeake Bay, Benjamin Marcek

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The Relationship Between Reproduction and Mortality in Triploid Crassostrea Virginica, Joseph L. Matt

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Genetic Analyses of Striped Bass in the Chesapeake Bay: an Investigation of Connectivity Among Virginia Subestuaries and an Evaluation of Close-Kinship Mark Recapture Methodology to Estimate Spawning Abundance., Savannah Michaelsen

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Impacts of Sea Level Rise on Tidal Wetland Extent and Distribution, Molly Mitchell

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The Development of Fiddler Crabs (Uca Spp.) as a Comparative Model System for the Parasitic Dinoflagellate, Hematodinium Perezi and its Natural Host the Blue Crab, Callinectes Sapidus, Patricia Anne O'Leary

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Multi-Scale Phylogenomics of Gadiformes With Emphasis on Hakes (Merluccius, Merlucciidae), Adela Y. Roa-Varon

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Crab Larval Abundance and Settlement Patterns in a Changing Chesapeake Bay, Itchika Sivaipram

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Consumption Patterns of Chesapeake Bay Fishes, Christopher James Sweetman

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The Development and Proliferation of Summer Algal Blooms in the Oligo/Poly-Haline Portion of the Chesapeake Bay - Observational and Numerical Modeling Studies, Zhengui Wang

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The Role of Ecological Interactions in Saltmarsh Geomorphic Processes, Bethany Lynn Williams

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Assessing the Impact of Land Use and Climate Change on Streamflow and Nutrient Delivery to the New River Estuary, NC, Shanna Williamson

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Developing Efficient High-Order Transport Schemes for Cross-Scale Coupled Estuary-Ocean Modeling, Fei Ye

Theses/Dissertations from 2017

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Nitrogen Isotope Fractionation and Toxin Production during The Uptake of Micromolar Concentrations of Nitrate, Ammonium, and Urea By A Marine Dinoflagellate, Christen Taylor Armstrong

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Juvenile Blue Crab Survival in Nursery Habitats: Predator Identification and Predation Impacts in Chesapeake Bay, Amanda Marie Bromilow

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Assessment of the High-Resolution Sediment Gravity Flow Record in Prince William Sound, Alaska, Elisabeth Rose Clyne

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Impact of Climate Variation and Human Adaptation on the Physical Transport Processes and Water Exchange in Chesapeake Bay, Jiabi Du

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Extensions and Applications of Mean Length Mortality Estimators for Assessment of Data-Limited Fisheries, Quang C. Huynh

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Using Water Quality Models in Management - A Multiple Model Assessment, Analysis of Confidence, and Evaluation of Climate Change Impacts, Isaac Irby

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Using High-Resolution Glider Data and Biogeochemical Modeling to Investigate Phytoplankton Variability in the Ross Sea, Daniel Edward Kaufman

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The Role of Seabed Resuspension on Oxygen and Nutrient Dynamics in Coastal Systems: A Numerical Modeling Study, Julia Miege Moriarty

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Age, Growth and Reproduction of Western North Atlantic Butterfly Rays (Myliobatiformes: Gymnuridae), with the Description of Two New Species, Kristene Teal Parsons

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Ecosystem Services of Restored Oyster Reefs in a Chesapeake Bay Tributary: Abundance and Foraging of Estuarine Fishes, Bruce William Pfirrmann

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Integrating Empirical Data and Ocean Drift Models to Better Understand Sea Turtle Strandings in Virginia, Bianca Silva Santos

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Reconstructing Coastal Forest Retreat and Marsh Migration Response to Historical Sea Level Rise, Nathalie Schieder

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Impact of Climate Change Variables on Nutrient Cycling by Marine Microorganisms in the Southern California Bight and Ross Sea, Antarctica, Jenna Lee Spackeen

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Spatiotemporal Abundance Patterns and Ecological Drivers of A Nearshore U.S. Atlantic Fish and Invertebrate Assemblage, Mark A. Stratton

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Impact of the Parasitic Nematode Anguillicoloides Crassus on American Eels (Anguilla Rostrata) in Chesapeake Bay, Zoemma Taudel Warshafsky

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Juvenile Blue Crab (Callinectes Sapidus) Response to Altered Nursery Habitat, Megan Wood

Theses/Dissertations from 2016

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Influence of Perkinsus Marinus Infection and Oyster Health on Levels of Human-Pathogenic Vibrios in Oysters, Lydia M. Bienlien

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Modeling Phytoplankton Community Response to Nutrient Loading and Climate Change in A Shallow Temperate Estuary, Sara Aimee Blachman

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Reproductive Altruism, Social Diversity and Host Association in Sponge-Dwelling Snapping Shrimps, Synalpheus, Tin Chi Solomon Chak

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Zooplankton Community Composition and Grazing in the Amazon River Plume and Western Tropical North Atlantic Ocean, Brandon J. Conroy

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Modulation of Watershed Nutrient Loads By Tidal Creek Ecosystems on The Virginia Eastern Shore, Britt Leighanne Dean

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Marine benthic predator-prey interactions and global change., Cassandra N. Glaspie

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Development of forested wetland ecological functions in a hydrologically controlled field experiment in Virginia, USA, Herman W. Hudson

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Influence of Structural Complexity and Location on The Habitat Value of Restored Oyster Reefs, Melissa Ann Karp

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Sturgeon (Acipenseridae) phylogeny, biogeography, & ontogeny., Katie May Laumann

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Assemblage Dynamics of Larval Fishes in the York River of Virginia and the Chesapeake Bay, Cindy Marlene Marin Martinez

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Biogeochemistry of Redox-Sensitive Elements in the Subterranean Estuary, Alison E. O'Connor

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Alexandrium Monilatum in the Lower Chesapeake Bay: Sediment Cyst Distribution and Potential Health Impacts on Crassostrea Virginica, Sarah Pease

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Patterns of Abundance and Community Dynamics in Atlantic Coastal Sharks, Cassidy Peterson

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Chesapeake Coastal Community Flood Vulnerability--Prediction and Verification, Alexander D. Renaud

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Modeling flocculation and deflocculation processes of cohesive sediments, Xiaoteng Shen

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The Effects of Drifting Fish Aggregating Devices on Bycatch in the Tropical Tuna Purse Seine Fisheries in the Atlantic and Indian Oceans, Julia Snouck-Hurgronje

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Population Dynamics of Gelatinous Zooplankton in the Chesapeake Bay and Sargasso Sea, and Effects on Carbon Export, Joshua Paul Stone

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On Shelf-Slope Water Mass Exchanges Near Washington Canyon and Norfolk Canyon in the Mid-Atlantic Bight, Haixing Wang

Theses/Dissertations from 2015

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Storm event impact on organic matter flux, composition and reactivity in Taskinas Creek, VA, Sarah Schillawski Cammer

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Ontogeny of the feeding apparatus and sensory modalities: Relationship to habitat differentiation among early life history stage drums (Sciaenidae) in the Chesapeake Bay, Alison L. Deary

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Human Induced Cyclical Erosion Due to Altered Sediment Bypassing Mechanisms of a Barrier Island and the Resultant Impact on the Housing Market, Andrew R. Fallon

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The Influence of Zostera marina and Ruppia maritima on Habitat Structure and Function in a Changing Environment in the Chesapeake Bay, Emily D. French

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The Reproductive Biology of Striped Bass (Morone saxatilis) in Chesapeake Bay, Carissa L. Gervasi

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Diel, Seasonal, and Interannual Patterns in Mesozooplankton Abundance in the Sargasso Sea, Jami Alora Ivory

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The Influence of Environmental Factors and Resource Availability on Zostera marina Flowering Intensity, Andrew J. Johnson

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The Influence of Short-Term Events on the Hydrographic and Biological Structure of the Southwestern Ross Sea, Randolph M. Jones

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A Model of Carrying Capacity and Ecosystem Impacts in a Large-Scale, Bivalve-Dominated Agro-Ecosystem: Hard Clam Aquaculture in Cherrystone Inlet, VA, Michael A. Kuschner

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The use of functional traits to elucidate the causes and consequences of biological diversity., Jonathan S. Lefcheck

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Linking structure and function of microbial communities responsible for sedimentary nitrogen processes in North Carolina estuaries, Jessica A. Lisa

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Signature of Recent Sediment Accumulating in Prince William Sound, Alaska: A Record of Storms, Earthquakes, and Seasonal Inputs, Nicole R. Marshall

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Phylogeny, Ontogeny and Distribution of the Ribbonfishes (Lampridiformes: Trachipteridae), Jennifer M. Martin

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Effects of commercial clam aquaculture on biogeochemical cycling in shallow coastal ecosystems, Anna Elizabeth Murphy

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Developing Methodologies for Studying Elasmobranchs and Other Data-Poor Species, Kristen L. Omori

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Condition of Juvenile Fishes in Estuarine Nursery Areas: Measuring Performance and Assessing Temporal and Spatial Dynamics with Multiple Indices., Ryan W. Schloesser

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Bay Scallop, Argopecten irradians, Restoration in the Virginia Coastal Bays: The Role of Predation on Spring Vs Fall Cohort Survival, Erika L. Schmitt

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Assessing the Impact of Climate Change on Proposed Restoration of the Lynnhaven River Ecosystem, Emily E. Skeehan

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Oyster Reef Connectivity Inferred Via Population Genetic Analysis, Brendan Douglas Turley

Theses/Dissertations from 2014

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Sediment Deposition and Reworking: A Modeling Study using Isotopically Tagged Sediment Classes, Justin J. Birchler

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Structure, Drivers, and Trophic Interactions of the Demersal Fish Community in Chesapeake Bay, Andre Buchheister

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Phylogenetic Systematics of the Prickleback Family Stichaeidae (Cottiformes: Zoarcoidei) using Morphological Data, Todd R. Clardy

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Biophysical Control of Oyster Reef Performance in Chesapeake Bay., Allison M. Colden

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Long-Term Change in Copepod Community Structure in the Western Antarctic Peninsula: Linkage to Climate and Implications for Carbon Cycling, Miram Rayzel Gleiber

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Development of a Large-Scale Storm Surge and High-Resolution Sub-Grid Inundation Model for Coastal Flooding Applications: A Case Study during Hurricane Sandy, Jon Derek Loftis

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Seasonal Movements, Habitat Utilization, and Comparative Scale Morphology of White Marlin (Kajikia albida) and Roundscale Spearfish (Tetrapturus georgii), Emily L. Loose