Submissions from 2024
The Helicobacter pylori methylome is acid-responsive due to regulation by the two-component system ArsRS and the type I DNA methyltransferase HsdM1 (HP0463), Elise H. Zimmerman, Erin L. Ramsey, Katherine E. Hunter, Sarah M. Villadelgado, Celeste M. Phillips, Ryan T. Shipman, and Mark H. Forsyth
Submissions from 2023
Seasonal Trends in Lysogeny in an Appalachian Oak-hickory Forest Soil, Melaina L. Jacoby, Graham D. Hogg, Madelein R. Assaad, and Kurt E. Williamson
Submissions from 2022
Use of Nest Web Cameras and Citizen Science to Quantify Osprey Prey Delivery Rate and Nest Success, Michael H. Academia and Harmony J. Dalgleish
Submissions from 2021
Comparison of Nutrient Accrual in Constructed Living Shoreline and Natural Fringing Marshes, Randolph Chambers, A. L. Gorsky, Robert Isdell, Molly Mitchell, and Donna Marie Bilkovic
Intertidal Zonation of Hemichordates in Soft Sediments, Kharis R. Schrage, Juselyn D. Tupik, and Jonathan D. Allen
The Annual Cycle for Whimbrel Populations using the Western Atlantic Flyway, B. D. Watts, F. Smith, C. Hines, L. Duval, and et al.
Whimbrel Populations Differ in Trans-atlantic Pathways and Cyclone Encounters, B. D. Watts, F. M. Smith, C. Hines, L. Duval, and et al.
Influence of Introduced Peregrine Falcons on the Distribution of Red Knots within a Spring Staging Site, B. D. Watts and Barry R. Truitt
Submissions from 2020
Linking Monitoring and Data Analysis to Predictions and Decisions for the Range-wide Eastern Black Rail Status Assessment, Conor P. McGowan, Nicole F. Angeli, Whitney A. Beisler, et al., F. M. Smith, and B. D. Watts
Submissions from 2019
Origin and Evolution of the Octoploid Strawberry Genome, Patrick P. Edger, Thomas J. Poorten, ..., Ron D. Smith, Scott J. Teresi, Joshua R. Puzey, and et al.
Culturing Echinoderm Larvae Through Metamorphosis, Jason Hodin, Andreas Hayland, Annie Mercier, Bruno Pernet, David L. Cohen, Jean-Francois Hamel, Jonathan D. Allen, Justin S. McAlister, Maria Byrne, and Sophie B. George
Trpm4 Ion Channels in pre-Bo¨tzinger Complex Interneurons Are Essential for Breathing Motor Pattern But Not Rhythm, Marina Cristina D. Picardo, Yae K. Sugimura, Kaitlyn E. Dorst, Prajkta S. Kallurkar, Victoria T. Akins, Xingru Ma, Ryoichi Teruyama, Romaine Guinamard, Kaiwen Kam, Margaret Saha, and Christopher A. Del Negro
Development of helical, fish-inspired cross-step filter for collecting harmful algae, Adam Schroeder, Lauren Marshall, Brian Trease, Anna Becker, and S. Laurie Sanderson
Localization of SUMO-modified Proteins Using Fluorescent Sumo-trapping Proteins, Rui Yin, Catherine Harvey, Diane C. Shakes, and Oliver Kerscher
Submissions from 2018
Asexual Reproduction of Marine Invertebrate Embryos and Larvae, Jonathan D. Allen, Adam M. Reitzel, and William Jaeckel
Polygyny does not explain the superior competitive ability of dominant ant associates in the African ant-plant, Acacia (Vachellia) drepanolobium, John H. Boyle, Dino J. Martins, Julianne Pelaez, Paul M. Musili, Staline Kibet, S. Kimani Ndung'u, and David Kenfack
Physical modeling of vortical cross-step flow in the American paddlefish, Polyodon spathula, Hannah Brooks, Grant Emerson Haines, M. Carly Lin, and S. Laurie Sanderson
Biofilm formation and toxin production provide a fitness advantage in mixed colonies of environmental yeast isolates, Bernadette M. Deschaine, Angela R. Heysel, B. Adam Lenhart, and Helen A. Murphy
Predator-induced Plasticity in Egg Capsule Deposition in the Mud Snail, Tritia obsoleta, Emily A. Harmon and Jonathan D. Allen
Shrinking Suburbs in a Time of Crisis, Justin B. Hollander, Colin Polsky, Dan Zinder, and Daniel M. Runfola
Data Descriptor: High content screen for identifying small-molecule LC3B-localization modulators in a renal cancer cell line, Likhitha Kolla, David S. Heo, Daniel P. Rosenberg, Sara A. Barlow, Anna A. Maximova, Emily E. Cassio, and William J. Buchser
Effects of point-count duration on estimated detection probabilities and occupancy of breeding birds, Matthias Leu, Matthew L. Farnsworth, Erica Fleishman, David S. Dobkin, Rick D. Scherer, Barry R. Noon, and Brett G. Dickson
Filling the BINs of life: Report of an amphibian and reptile survey of the Tanintharyi (Tenasserim) Region of Myanmar, with DNA barcode data, Daniel G. Mulcahy, Justin L. Lee, Aryeh H. Miller, Mia Chand, Myint Kyaw Thura, and George R. Zug
N-terminal Sumoylation of Centromeric Histone H3 Variant Cse4 Regulates Its Proteolysis To Prevent Mislocalization to Non-centromeric Chromatin, Kentaro Ohkuni, Reuben Levy-Myers, Jack Warren, Wei-Chun Au, Yoshimitsu Takahashi, Richard E. Baker, and Munira A. Basrai
SUMO-Targeted Ubiquitin Ligases (STUbLs) Reduce the Toxicity and Abnormal Transcriptional Activity Associated With a Mutant, Aggregation-Prone Fragment of Huntingtin, Kentaro Ohkuni, Nagesh Pasupala, Jennifer Peek, and Oliver Kerscher
SUMO targeting of a stress-tolerant Ulp1 SUMO protease, Jennifer Peek, Catherine Harvey, Dreux Gray, Danny Rosenberg, Likhitha Kolla, Reuben Levy-Myers, Rui Yin, , and Oliver Kerscher
Sex- and Gamete-Specific Patterns of X Chromosome Segregation in a Trioecious Nematode, Sophie Tandonnet, Maureen C. Farrell, Georgios D. Koutsovoulos, Mark L. Blaxter, Manish Parihar, Penny L. Sadler, and Diane C. Shakes
Long-term Monitoring of a Successful Recovery Program of Peregrine Falcons in Virginia, B. D. Watts, Mitchell A. Byrd, E. K. Mojica, S. Padgett, S. R. Harding, and C. A. Koppie
Submissions from 2017
Obligate planktotrophy in the Götte's Larva of Stylochus ellipticus (Platyhelminthes), Jonathan D. Allen, A. M. L. Klompen, E. J. Alpert, and A. J. Reft
The Effects of Salinity and pH on Fertilization, Early Development and Hatching in the Crown-of-Thorns Seastar, Jonathan D. Allen, Kharis R. Schrage, Shawna A. Foo, Sue-Ann Watson, and Maria Byrne
Genetic signatures for Helicobacter pylori strains of West African origin, Kennady K. Bullock and Mark H. Forsyth
Estimation of the occupancy of butterflies in diverse biogeographic regions, Erica Fleishman, Rick D. Scherer, Angela Zappalla, and Matthias Leu
Variation in Reproductive Success Across Captive Populations: Methodological Differences, Potential Biases and Opportunities, Simon C. Griffith, (…), John Swaddle, Claire W. Varian-Ramos, and et al.
The implications of American chestnut reintroduction on landscape dynamics and carbon storage, Eric J. Gustafson, Arjan de Bruijn, Nathanael Lichti, Douglass F. Jacobs, Brian R. Sturtevant, Jane Foster, Brian R. Miranda, and Harmony J. Dalgleish
Integration of swimming kinematics and ram suspension feeding in a model American paddlefish, Polyodon spathula, Grant Emerson Haines and S. Laurie Sanderson
Effectiveness and Adoption of a Drawing-to-Learn Study Tool for Recall and Problem Solving: Minute Sketches with Folded Lists, Paul D. Heideman, K. Adryan Flores, Lu M. Sevier, and Kelsey E. Trouton
Correlation Between Investment in Sexual Traits and Valve Sexual Dimorphism in Cyprideis Species (Ostracoda), Maria João Fernandes Martins, Gene Hunt, Rowan Lockwood, John P. Swaddle, and David J. Horne
Genetic variation and clonal diversity in introduced populations of Mimulus guttatus assessed by genotyping at 62 single nucleotide polymorphism loci, Pauline O. Pantoja, Violeta I. Simon-Porcar, Joshua R. Puzey, and Mario Vallejo-Marin
Integrative behavioral ecotoxicology: bringing together fields to establish new insight to behavioral ecology, toxicology, and conservation, Elizabeth K. Peterson, David B. Buchwalter, Jacob L. Kerby, Matthew K. LeFauve, ClaireW. Varian-Ramos, and John P. Swaddle
Population structure and local selection yield high genomic variation in Mimulus guttatus, Joshua R. Puzey, John H. Willis, and John K. Kelly
Known mutator alleles do not markedly increase mutation rate in clinical Saccharomyces cerevisiae strains, Daniel A. Skelly, Paul M. Magwene, Brianna Meeks, and Helen A. Murphy
A Whole-Transcriptome Approach to Evaluating Reference Genes for Quantitative Gene Expression Studies: A Case Study in Mimulus, Kimmy A. Stanton, Patrick P. Edger, Joshua R. Puzey, Taliesin Kinser, Philip Cheng, Daniel M. Vernon, Nancy R. Forsthoefel, and Arielle M. Cooley
Exposure to dietary mercury alters cognition and behavior of zebra finches, John P. Swaddle, Tessa R. Diehl, Capwell E. Taylor, Aaron S. Fanaee, Jessica L. Benson, Neil R. Huckstep, and Daniel A. Cristol
Lamin A and microtubules collaborate to maintain nuclear morphology, Zeshan Tariq, Haoyue Zhang, Alexander Chia-Liu, Yang Shen, Yantenew Gete, Zheng-Mei Xiong, Claire Tocheny, Leonard Campanello, Di Wu, Wolfgang Losert, and Kan Cao
A communal catalogue reveals Earth’s multiscale microbial diversity, L R. Thompson and Daniel A. Cristol
Mapping Bald Eagle Activity Shadows Around Communal Roosts, B. D. Watts and Courtney Turrin
Cytoskeletal variations in an asymmetric cell division support diversity in nematode sperm size and sex ratios, Ethan S. Winter, Anna Schwarz, Gunar Fabig, Jessica L. Feldman, Andre Pires-daSilva, Penny L. Sadler, and Diane C. Shakes
Submissions from 2016
Blood Mercury Levels of Zebra Finches Are Heritable: Implications for the Evolution of Mercury Resistance, Kenton A. Buck, Claire W. Varian-Ramos, Daniel A. Cristol, and John P. Swaddle
Fish introductions and light modulate food web fluxes in tropical streams: a whole-ecosystem experimental approach, Sarah M. Collins, Steven A. Thomas, Thomas Heatherly, Keeley L. MacNeill, Antoine O. H. C. Leduc, Andres Lopez-Sepulcre, Bradley A. Lamphere, Rana W. El-Sabaawi, David N. Reznick, Catherine M. Pringle, and Alexander S. Flecker
Consequences of Shifts in Abundance and Distribution of American Chestnut for Restoration of a Foundation Forest Tree, Harmony J. Dalgleish, C. Dana Nelson, C. Dana Nelson, and John A. Scrivani
Separating oil from water: suspension-feeding goldfish ingest liquid vegetable oil, Kristin Edwards, Gary Rice, and S. Laurie Sanderson
Modeling the aggregated exposure and responses of bowhead whales Balaena mysticetus to multiple sources of anthropogenic underwater sound, William T. Ellison, Roberto Racca, Christopher W. Clark, and Matthias Leu
Clinical Associations of Immature Breathing in Preterm Infants. Part 1: Central Apnea, Karen Fairchild, Mary Mohr, Alix Paget-Brown, et al., and John B. Delos
SUMOylation, Oliver Kerscher
Genetic Evolution of a Helicobacter pylori Acid-Sensing Histidine Kinase and Gastric Disease, Uma Krishna, Judith Romero-Gallo, Giovanni Suarez, and Mark H. Forsyth
Genetic Evolution of a Helicobacter pylori Acid-Sensing Histidine Kinase and Gastric Disease, Uma Krishna, Judith Romero-Gallo, Giovanni Suarez, and Mark H. Forsyth
Utilization Probability Map for Migrating Bald Eagles in Northeastern North America: A Tool for Siting Wind Energy Facilities and Other Flight Hazards, Elizabeth K. Mojica, B. D. Watts, and Courtney L. Turrin
SUMO-targeted ubiquitin ligase (STUbL) Slx5 regulates proteolysis of centromeric histone H3 variant Cse4 and prevents its mislocalization to euchromatin, Kentaro Ohkuni, Yoshimitsu Takahashi, Alyona Flup, Josh La, Wei-Chun Au, Nagesh Pasupala, Ruben Levy-Meyers, Jack Warren, Alexander Strunnikov, Richard E. Baker, Oliver Kerscher, Kerry Bloom, and Munira A. Basrai
SUMO-targeted ubiquitin ligase (STUbL) Slx5 regulates proteolysis of centromeric histone H3 variant Cse4 and prevents its mislocalization to euchromatin, Kentaro Ohkuni, Yoshimitsu Takahashi, Alyona Fulp, and Oliver Kerscher
Experimental Exposure to Urban and Pink Noise Affects Brain Development and Song Learning in Zebra Finches (Taenopygia guttata), Dominique A. Potvin, Michael T. Curcio, John P. Swaddle, and Scott A. MacDougall-Shackleton
Nuclear Import of the Thyroid Hormone Receptor α1 is Mediated by Importin 7, Importin β1, and Adaptor Importin α1, Vincent R. Roggero, Jibo Zhang, Laura E. Parente, Yazdi Doshi, and Lizabeth A. Allison
A Case of Beare-Stevenson Syndrome with Unusual Manifestations, Nitin Ron, Samuel Leung, Karen Laurie David, and Alexis Gerber
Fish mouths as engineering structures for vortical cross-step filtration, S. Laurie Sanderson, Erin Roberts, Jillian Lineburg, and Hannah Brooks
Communicative Coping Behavior Checklist: Observation of Persons With Dementia in the Home Environment, Pamela A. Saunders, Julia Ruth, Lauren Latella, and Nicholas Talisman
Mobilization of mercury from lean tissues during simulated migratory fasting in a model songbird, Chad L. Seewagen, Chad L. Seewagen, Daniel A. Cristol, and Alexander R. Gerson
Functional Interactions between Mammalian Respiratory Rhythmogenic and Premotor Circuitry, Hanbing Song, John A. Hayes, Nikolas C. Vann, Xueying Wang, Christopher A. Del Negro, and M. Drew LaMar
A Sonic Net Excludes Birds from an Airfield: Implications for Reducing Bird Strike and Crop Losses, John P. Swaddle, Dana L. Moseley, Mark H. Hinders, and Elizabeth P. Smith
Strongly asymmetric hybridization barriers shape the origin of a new polyploid species and its hybrid ancestor, Mario Vallejo-Marin, Michelle Yuequi Lee, Arielle M. Cooley, and Joshua R. Puzey
Submissions from 2015
Crosstalk between the HpArsRS two-component system and HpNikR is necessary for maximal activation of urease transcription, Beth M. Carpenter, Henan Gancz, Stephanie L. Servetas, Daniel R. Hallinger, and Mark H. Forsyth
Use of ESI-FTICR-MS to Characterize Dissolved Organic Matter in Headwater Streams Draining Forest-Dominated and Pasture-Dominated Watersheds, Randolph Chambers
Transcriptomic Characterization of an Infection of Mycobacterium smegmatis by the Cluster A4 Mycobacteriophage Kampy, Andrew Halleran, Samuel Clamons, and Margaret Saha
Mucous contribution to gut nutrient content in American gizzard shad Dorosoma cepedianum, L. L. Holley, M K. Heidman, Randolph Chambers, and S. Laurie Sanderson
Eastern Bluebirds Alter their Song in Response to Anthropogenic Changes in the Acoustic Environment, Caitlin R. Kight and John P. Swaddle
Driver knowledge and attitudes on animal vehicle collisions in Northern Tanzania, John Kioko, Christian Kiffner, Payton Phillips, and Claire Patterson-Abrolat
Drosophila Muller F Elements Maintain a Distinct Set of Genomic Properties Over 40 Million Years of Evolution, Wilson Leung, Christopher D. Shaffer, William Barshop, Matthew Wawersik, and Elizabeth Kiernan
Genetic variation in male sexual behaviour in a population of white-footed mice in relation to photoperiod, Kathy Sharp, Donna Bucci, Paul K. Zelensky, Alanna Chesney, Wendy Tidhar, Paul D. Heideman, and David R. Broussard
Forward Genetics Identifies a Requirement for the Izumo-like Immunoglobulin Superfamily spe-45 Gene in Caenorhabditis elegans Fertilization, Gunasekaran Singaravelu, Sina Rahimi, Amber Krauchunas, and Diane Shakes
Mechanisms Leading to Rhythm Cessation in the Respiratory PreBotzinger Complex Due to Piecewise Cumulative Neuronal Deletions, Hanbing Song, John A. Hayes, Nicolas A. Vann, M. Drew LaMar, and Christopher A. Del Negro
Disrupted seasonal biology impacts health, food security and ecosystems, T. J. Stevenson, M. E. Visser, S. A. M. Martin, and P. Heideman
Multiple Exportins Influence Thyroid Hormone Receptor Localization, Kelly Subramanian, Rose C. Dziedzic, Hallie N. Nelson, Mary E. Stern, Vincent R. Roggero, Cornelius Bondzi, and Lizabeth A. Allison
Multiple exportins influence thyroid hormone receptor localization, Kelly Sue Subramanian, Rose C. Dziedzic, Hallie N. Nelson, Erin M. Bertrand, John P. McCrow, Ahmed Moustafa, Rachel E. Sipler, Jenna L. Spackeen, and Deborah A. Bronk
Nest Guarding in Chesapeake Bay Bald Eagles, Courtney Turrin and B. D. Watts
Landfill Use by Bald Eagles in the Chesapeake Bay Region, Courtney Turrin, B. D. Watts, and Elizabeth K. Mojica
Speciation by genome duplication: Repeated origins and genomic composition of the recently formed allopolyploid species Mimulus peregrinus, Mario Vallejo-Marin, Richard J. A. Buggs, Arielle M. Cooley, and Joshua R. Puzey
A Regression-Based Differential Expression Detection Algorithm for Microarray Studies with Ultra-Low Sample Size, Daniel Vasiliu, Samuel Clamons, Molly McDonough, Brian Rabe, and Margaret Saha
Seasonal Variation in Space Use by Nonbreeding Bald Eagles Within the Upper Chesapeake Bay, B. D. Watts, Elizabeth K. Mojica, and B. J. Paxton
Control of plant stem cell function by conserved interacting transcriptional regulators, Yun Zhou, Xing Liu, Zachary L. Nimchuk, and Eric M. Engstrom
Submissions from 2014
Stormwater runoff drives viral community composition changes in inland freshwaters, Randolph Chambers
The Influence of Recreational Crabbing Regulations on Diamondback Terrapin By-Catch, Randolph Chambers
Sonication-facilitated Immunofluorescence Staining of Late-stage Embryonic and Larval Drosophila Tissues In Situ, Ashley Fidler, Lauren Boulay, and Matthew Wawersik
Projecting current and future location, quality, and connectivity of habitat for breeding birds in the Great Basin, E. Fleishman, J. R. Thomson, J. R. Thomson, and M. Leu
The Pseudophosphatase MK-STYX Induces Neurite-Like Outgrowths in PC12 Cells, Brittany M. Flowers, Lauren E. Rusnak, Kristen E. Wong, Dallas A. Banks, Michelle R. Munyikwa, Alexander G. McFarland, and Shanta D. Hinton
Tuscaloosa: University of Alabama Press, 2011. xi + 313 pp. (Paper us$35.00), Andrew D. Halleran, Morgan Sehdev, Brian A. Rabe, Ryan W. Huyck, Cheyenne C. Williams, and Margaret S. Saha
Repetitive Sequence Variations in the Promoter Region of the Adhesin-Encoding Gene sabA of Helicobacter pylori Affect Transcription, Vivian C. Harvey, Catherine R. Acio, Amy K. Bredehoft, Laurence Zhu, Daniel R. Hallinger, Vanessa Quinlivan-Repasi, Samuel E. Harvey, and Mark H. Forsyth
A Broadly Implementable Research Course in Phage Discovery and Genomics for First-Year Undergraduate Students, Tuajuanda C. Jordan, Sandra H. Burnett, Susan Carson, and Margaret S. Saha
Ecological Scale of Bird Community Response to Pinon-Juniper Removal, Steven T. Knick, Steven E. Hanser, M. Leu, and M. Leu
The Role of Voltage-Gated Calcium Channels in Neurotransmitter Phenotype Specification: Coexpression and Functional Analysis in Xenopus laevis, Brittany B. Lewis, Lauren E. Miller, Wendy A. Herbst, and Margaret S. Saha
A Central Support System Can Facilitate Implementation and Sustainability of a Classroom-Based Undergraduate Research Experience (CURE) in Genomics, David Lopatto, Charles Hauser, Christopher J. Jones, and Michael J. Wolyniak
The Jak-STAT Target Chinmo Prevents Sex Transformation of Adult Stem Cells in the Drosophila Testis Niche, Qing Ma, Erika L. Matunis, and Matthew Wawersik
Dissection and Downstream Analysis of Zebra Finch Embryos at Early Stages of Development, Jessica R. Murray, Monika E. Stanciauskas, Tejas S. Aralere, and Margaret S. Saha
