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Submissions from 2015

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Trophic cascades in the western Ross Sea, Antarctica: revisited, David G. Ainley, Grant Ballard, Randolph M. Jones, Dennis Jongsomjit, Stephen D. Pierce, Walker O. Smith, and Sam Veloz

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Umbrella species in marine systems: using the endangered humphead wrasse to conserve coral reefs, Kevin C. Weng, Martin W. Pedersen, Gen A. Del Raye, Jennifer E. Caselle, and Andrew E. Gray

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Use of ESI-FTICR-MS to Characterize Dissolved Organic Matter in Headwater Streams Draining Forest-Dominated and Pasture-Dominated Watersheds, YueHan Lu, Xiaping Li, Rajaa Mesfioui, James E. Bauer, R M. Chambers, Elizabeth A. Canuel, and Patrick Hatcher

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Vertical mixing, critical depths, and phytoplankton growth in the Ross Sea, WO Smith and RM Jones

Submissions from 2014

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A Hydrodynamic and Sediment Transport Model for the Waipaoa Shelf, New Zealand: Sensitivity of Fluxes to Spatially-Varying Erodibility and Model Nesting, Julia M. Moriarty, Courtney K. Harris, and Mark G. Hadfield

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Ameson metacarcini sp nov (Microsporidia) infecting the muscles of Dungeness crabs Metacarcinus magister from British Columbia, Canada, HJ Small, GR Meyer, GD Stentiford, JS Dunham, K Bateman, and Jeffrey D. Shields

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A Missing Dimension in Measures of Vaccination Impacts, M. Gabriela M. Gomes, Marc Lipsitch, Andrew R. Wargo, Gael Kurath, Carlota Rebelo, Graham F. Medley, and Antonio Coutinho

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Biogeochemical variability in the southern Ross Sea as observed by a glider deployment, DE Kaufman, MAM Friedrichs, WJ Smith Jr., BY Queste, and KJ Heywood

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Bonamia exitiosa transmission among, and incidence in, Asian oyster Crassostrea ariakensis under warm euhaline conditions, C Audemard, RB Carnegie, KM Hill, CH Peterson, and EM Burreson

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Bonamia parasites: a rapidly changing perspective on a genus of important mollusc pathogens, MY Engelsma, SC Culloty, SA Lynch, I Arzul, and RB Carnegie

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Breeding And Domestication Of Eastern Oyster (Crassostrea Virginica) Lines For Culture In The Mid-Atlantic, Usa: Line Development And Mass Selection For Disease Resistance, Anu Frank-Lawale, Standish K. Allen Jr., and Lionel Degremont

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Coastal response to late-stage transgression and sea-level highstand, CJ Hein, DM FitzGerald, JT de Menezes, WJ Cleary, and AHF Klein

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Dimensions of biodiversity in Chesapeake Bay demersal fishes: patterns and drivers through space and time, Jonathan S. Lefcheck, Andre Buchheister, Katie May Laumann, Mark A. Stratton, Kathryn L. Sobocinski, Soloman Chak, Todd R. Clardy, Pamela L. Reynolds, Robert J. Latour, and Emmett J. Duffy

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Earth is (mostly) flat: Apportionment of the flux of continental sediment over millennial time scales Comment, JA Warrick, JD Milliman, DE Walling, RJ Wasson, JPM Syvitski, and RE Aalto

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Ecological value of coastal habitats for commercially and ecologically important species, RD Seitz, H Wennhage, U Bergstrom, RN Lipcius, and T Ysebaert

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Effect of temperature on rates of ammonium uptake and nitrification in the western coastal Arctic during winter, spring, and summer, SE Baer, TL Connelly, RE Sipler, PL Yager, and DA Bronk

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Estimating Sustainable Harvests Of Eastern Oysters, Crassostrea Virginica, TM Soniat, N Cooper, EN Powell, JM Klinck, M Abdelguerfi, S Tu, Roger L. Mann, and PD Banks

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Evidence of Eelgrass (Zostera marina) Seed Dispersal by Northern Diamondback Terrapin (Malaclemys terrapin terrapin) in Lower Chesapeake Bay, Diane C. Tulipani and Romuald N. Lipcius

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Extinction risk and conservation of the world's sharks and rays, Nicholas K. Dulvy and John A. Musick

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Field experimental evidence that grazers mediate transition between microalgal and seagrass dominance, PL Reynolds, JP Richardson, and JE Duffy

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Home Range And Seasonal Movements Of Black Sea Bass (Centropristis Striata) During Their Inshore Residency At A Reef In The Mid-Atlantic Bight, Mary C. Fabrizio, John P. Manderson, and Jeffrey P. Pessutti

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Host behavior alters spiny lobster-viral disease dynamics: a simulation study, TW Dolan, MJ Butler, and JD Shields

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Impacts of freshwater flushing on anammox community structure and activities in the New River Estuary, USA, JA Lisa, B Song, CR Tobias, and KA Duernberger

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Individual, population, and ecosystem effects of hypoxia on a dominant benthic bivalve in Chesapeake Bay, W. Christopher Long, Rochelle D. Seitz, Bryce J. Brylawski, and Romuald N. Lipcius

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Inner-shelf circulation and sediment dynamics on a series of shoreface-connected ridges offshore of Fire Island, NY, JC Warner, JH List, WC Schwab, G Voulgaris, B Armstrong, and N Marshall

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Interactions between barrier islands and backbarrier marshes affect island system response to sea level rise: Insights from a coupled model, David C. Walters, Laura J. Moore, Orencio Duran Vincent, Sergio Fagherazzi, and Giulio Mariotti

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Investigating the Effect of Recruitment Variability on Length-Based Recruitment Indices for Antarctic Krill Using an Individual-Based Population Dynamics Model, Stephane Thanassekos, Martin J. Cox, and Keith Reid

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Investigating the relationship between biodiversity and ecosystem multifunctionality: challenges and solutions, Jarrett E. K. Byrnes, Lars Gamfeldt, Forest Isbell, Jonathan S. Lefcheck, John N. Griffin, Andy Hector, Bradley J. Cardinale, David U. Hooper, Laura E. Dee, and J. Emmett Duffy

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Linking DNRA community structure and activity in a shallow lagoonal estuarine system, Bongkeun Song, Jessica A. Lisa, and Craig R. Tobias

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Longitudinal study of winter mortality disease in Sydney rock oysters Saccostrea glomerata, ZB Spiers, M Gabor, SA Fell, RB Carnegie, M Dove, and Et al.

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Microcell parasites of molluscs: introduction to DAO Special 7, RB Carnegie and MY Engelsma

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Model Behavior and Sensitivity in an Application of the Cohesive Bed Component of the Community Sediment Transport Modeling System for the York River Estuary, VA, USA, Kelsey A. Fall, Courtney K. Harrid, Carl T. Friedrichs, J. Paul Rineheimer, and Christopher R. Sherwood

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Multifunctionality does not imply that all functions are positively correlated, J Byrnes, JS Lefcheck, L Gamfeldt, JN Griffin, and F Isbell

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Multiplatform, multidisciplinary investigations of the impacts of Modified Circumpolar Deep Water in the Ross Sea, Antarctica, WO Smith Jr., KT Goetz, DE Kaufman, BY Queste, V Asper, DP Costa, MS Dinniman, MAM Friedrichs, and et al

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Occurrence of Juvenile Paralichthys lethostigma (Southern Flounder) in Tributaries of Chesapeake Bay, SC Lusk, BE Watkins, A Rhea, CB Dillman, and EJ Hilton

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Ocean processes at the Antarctic continental slope, KJ Heywood, S Schmidtko, C Heuze, J Kaiser, TD Jickells, Walker O. Smith, and Et al.

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Pan-Atlantic analysis of the overlap of a highly migratory species, the leatherback turtle, with pelagic longline fisheries, S Fossette, MJ Witt, P Miller, MA Nalovic, D Albareda, and Et al.

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Paradox reconsidered: Methane oversaturation in well-oxygenated lake waters, KW Tang, DF McGinnis, K Frindte, V Bruchert, and HP Grossart

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Phylogenetics of Bonamia parasites based on small subunit and internal transcribed spacer region ribosomal DNA sequence data, KM Hill, NA Stokes, SC Webb, PM Hine, MA Kroeck, JD Moore, MS Morely, KS Reece, Eugene M. Burreson, and RB Carnegie

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Phytoplankton growth rates in the Ross Sea, Antarctica, Anna F. Mosby and Walker O. Smith

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Small-Scale Vertical Movements of Summer Flounder Relative to Diurnal, Tidal, and Temperature Changes, Mark J. Henderson and Mary C. Fabrizio

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Species diversity of the deep-water gulper sharks (Squaliformes: Centrophoridae: Centrophorus) in North Atlantic waters - current status and taxonomic issues, A Verissimo, CF Cotton, RH Buch, J Guallart, and GH Burgess

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Structure and function of zooplankton-associated bacterial communities in a temperate estuary change more with time than with zooplankton species, Samatha L. Bickel, Kam W. Tang, and Hans-Peter Grossart

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Temperature, hypoxia, and mycobacteriosis: effects on adult striped bass Morone saxatilis metabolic performance, D Lapointe, WK Vogelbein, MC Fabrizio, DT Gauthier, and RW Brill

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Temperature sensitivity of organic-matter decay in tidal marshes, Matthew L. Kirwan, G. R. Guntenspergen, and J. A. Langley

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Temporal Variation In Fecundity And Spawning In The Eastern Oyster, Crassostrea Virginica, In The Piankatank River, Virginia, Roger L. Mann, Melissa Southworth, Ryan B. Carnegie, and Rita K. Crockett

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The assimilation of satellite-derived data into a one-dimensional lower trophic level marine ecosystem model, Yongjin Xiao and Marjorie A.M. Friedrichs

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The effects of changing winds and temperatures on the oceanography of the Ross Sea in the 21st century, WO Smith, MS Dinniman, EE Hofmann, and JM Klinck

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The Storm Surge and Sub-Grid Inundation Modeling in New York City during Hurricane Sandy, Harry V. Wang, Jon Derek Loftis, Zhou Liu, David Forrest, and Joseph Zhang

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The Storm Surge and Sub-Grid Inundation Modeling in New York City during Hurricane Sandy, Harry V. Wang, Jon Derek Loftis, Zhuo Liu, David Forrest, and Joseph Zhang

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The vertical structure of the circulation and dynamics in Hudson Shelf Valley, Steven J. Lentz, Bradford Butman, and Courtney K. Harris

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Ultrastructural comparison of Bonamia spp. (Haplosporidia) infecting ostreid oysters, PM Hine, RB Carnegie, MA Kroeck, A Villalba, MY Engelsma, and EM Burreson

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Urea Uptake and Carbon Fixation by Marine Pelagic Bacteria and Archaea during the Arctic Summer and Winter Seasons, TL Connelly, SE Baer, JT Cooper, DA Bronk, and B Wawrik

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Using biogeochemical data assimilation to assess the relative skill of multiple ecosystem models in the Mid-Atlantic Bight: effects of increasing the complexity of the planktonic food web, Y. Xiao and Marjorie A.M. Friedrichs

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Value of coastal habitats for exploited species: introduction to a theme set of articles, RD Seitz

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Winter and spring controls on the summer food web of the coastal West Antarctic Peninsula, Grace K. Saba, William R. Fraser, Vincent S. Saba, Richard A. Iannuzzi, Kaycee E. Coleman, Scott C. Doney, Hugh W. Ducklow, Douglas G. Martinson, Travis N. Miles, Donna L. Patterson-Fraser, Sharon E. Stammerjohn, and Deborah K. Steinberg

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Zooplankton carcasses and non-predatory mortality in freshwater and inland sea environments, KW Tang, MI Gladyshev, OP Dubovskaya, G Kirillin, and HP Grossart

Submissions from 2013

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Age, Growth, and Reproductive Biology of Cownose Rays in Chesapeake Bay, Robert A. Fisher, Garrett C. Call, and R. Dean Grubbs

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Age-specific responses to spring temperature in a migratory songbird: older females attempt more broods in warmer springs, L. Bulluck, S. Huber, C. Viverette, and C. Blem

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Biodiversity in a changing climate: a synthesis of current and projected trends in the US, MD Staudinger, SL Carter, MS Cross, NS Dubois, JE Duffy, and Et al.

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Broad-scale association between seagrass cover and juvenile blue crab density in Chesapeake Bay, Gina M. Ralph, Rochelle Seitz, Robert Orth, Kathleen E. Knick, and Romuald N. Lipcius

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Carbon fluxes and pelagic ecosystem dynamics near two western Antarctic Peninsula Adélie penguin colonies: an inverse model approach, Sevrine F. Sailley, Hugh W. Ducklow, Holly V. Moeller, William R. Fraser, Oscar M. Schofield, Deborah K. Steinberg, Lori M. Garzio, and Scott C. Doney

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Combining observations and numerical model results to improve estimates of hypoxic volume within the Chesapeake Bay, USA, A.J. Bever, Marjorie A.M. Friedrichs, Carl T. Friedrichs, M. E. Scully, and Lyon Lanerolle

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Comparative visual ecophysiology of mid-Atlantic temperate reef fishes, Andrij Z. Horodysky, Richard W. Brill, Kendyl C. Crawford, Elizabeth S. Seagroves, and Andrea K. Johnson

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Compensatory Growth of the Sandbar Shark in the Western North Atlantic Including the Gulf of Mexico, J. G. Romine, John A. Musick, and R. A. Johnson

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Conservation in the first internal transcribed spacer (ITS1) region of Hematodinium perezi (genotype III) from Callinectes sapidus, KMP Lohan, HJ Small, JD Shields, AR Place, and KS Reece

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Contribution of sea ice in the Southern Ocean to the cycling of volatile halogenated organic compounds, A Granfors, A Karlsson, E Mattsson, WO Smith, and K Abrahamsson

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Decline and Local Extinction of Caribbean Eusocial Shrimp, Emmett J. Duffy, Kenneth S. Macdonald, Kristin M. Hultgren, Tin Chi Solomon Chak, and Dustin Rubenstein

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Denitrification and nutrient assimilation on a restored oyster reef, Lisa M. Kellogg, Jeffery Cornwell, Michael S. Owens, and Kennedy Paynter

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Differential compartmentalization of memory B cells versus plasma cells in salmonid fish, CY Ma, JM Ye, and SL Kaattari

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Distribution and sources of organic matter in surface marine sediments across the North American Arctic margin, Miguel A. Goni, Alison E. O'Connor, Zou Zou Kyzyk, Mark B. Yunker, Charles Gobeil, and Robie W. MacDonald

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Distribution, prevalence, and genetic analysis of Panulirus argus virus 1 (PaV1) from the Caribbean Sea, J Moss, D Behringer, JD Shields, A Baeza, A Aguilar-Perera, and Et al.

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Ecosystem effects of shell aggregations and cycling in coastal waters: an example of Chesapeake Bay oyster reefs, G G. Waldbusser, E N. Powell, and R Mann

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Effects of microalgal exudates and intact cells on subtropical marine zooplankton, NJ Silva, KW Tang, and RM Lopes

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Effects of seasonal hypoxia on macrobenthic production and function in the Rappahannock River, Virginia, USA, SK Sturdivant, RD Seitz, and RJ Diaz

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Envisioning a Marine Biodiversity Observation Network, JE Duffy, LA Amaral-Zettler, DG Fautin, G Paulay, TA Rynearson, and Et al.

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Extratropical storm inundation testbed: Intermodel comparisons in Scituate, Massachusetts, Changsheng Chen, Et al., and Harry V. Wang

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Fish Species Distribution in Seagrass Habitats of Chesapeake Bay are Structured by Abiotic and Biotic Factors, Jason J. Schaffler, Jacques van Montfrans, Cynthia M. Jones, and Robert J. Orth

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Fluid Driven by Tangential Velocity and Shear Stress: Mathematical Analysis, Numerical Experiment, and Implication to Surface Flow, H. S. Tang, L. Z. Zhang, J. P. -Y. Maa, H. Li, C.B. Jiang, and R. Hussain

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Genetic Population Structure of US Atlantic Coastal Striped Bass (Morone saxatilis), DT Gauthier, CA Audemard, JEL Carlsson, TL Darden, MR Denson, KS Reece, and J Carlsson

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Habitat associations and dispersal of black sea bass from a mid-Atlantic Bight reef, Mary C. Fabrizio, John P. Manderson, and Jeffrey P. Pessutti

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Haplosporidium littoralis sp nov.: a crustacean pathogen within the Haplosporida (Cercozoa, Ascetosporea), GD Stentiford, KS Bateman, NA Stokes, and RB Carnegie

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Improved method for quantifying the air-sea flux of volatile and semi-volatile organic carbon, EJ Hauser, RM Dickhut, R Falconer, and AS Wozniak

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Indication of Density-Dependent Changes in Growth and Maturity of the Barndoor Skate on Georges Bank, Karson Coutre, Todd Gedamke, David B. Rudders, William B. Driggers III, David M. Koester, and James A. Sulikowski

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Inferring tidal wetland stability from channel sediment fluxes: Observations and a conceptual model, NK Ganju, NJ Nidzieko, and ML Kirwan

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Internal versus external drivers of periodic hypoxia in a coastal plain tributary estuary: the York River, Virginia, SJ Lake, MJ Brush, IC Anderson, and HI Kator

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Introduction to special section on The U.S. IOOS Coastal and Ocean Modeling Testbed, Richard A. Luettich Jr, L. Donelson Wright, Richard Signell, Carl T. Friedrichs, Marjorie A.M. Friedrichs, John Harding, Katja Fennel, Eoin Howlett, Sara Graves, Elizabeth Smith, Gary Crane, and Rebecca Baltes

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Krill biomass and aggregation structure in relation to tidal cycle in a penguin foraging region off the Western Antarctic Peninsula, KS Bernard and DK Steinberg

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Linking dynamics of transport timescale and variations of hypoxia in the Chesapeake Bay, Bo Hong and Jian Shen

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Longitudinal variability of size-fractionated N-2 fixation and DON release rates along 24.5 degrees N in the subtropical North Atlantic, Mar Benavides, Deborah A. Bronk, Nona S.R. Agawin, M. Dolores Perez-Hernandez, Alonso Hernandez-Guerra, and Javier Aristegui

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Microphytobenthos and benthic macroalgae determine sediment organic matter composition in shallow photic sediments, A. K. Hardison, E. A. Canuel, I. C. Anderson, C. R. Tobias, B. Veuger, and M. N. Waters

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Microzooplankton grazing along the Western Antarctic Peninsula, LM Garzio, DK Steinberg, M Erickson, and HW Ducklow

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Migratory And Within-Estuary Behaviors Of Adult Summer Flounder (Paralichthys Dentatus) In A Lagoon System Of The Southern Mid-Atlantic Bight, Karen M. Capossela, Mary C. Fabrizio, and Richard Brill

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Modeling the Effect of Hypoxia on Macrobenthos Production in the Lower Rappahannock River, Chesapeake Bay, USA, Samuel Kersey Sturdivant, Mark J. Brush, and Robert J. Diaz

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Molecular and functional ecology of aquatic microbial symbionts, Hans-Peter Grossart, Lasse Riemann, and Kam W. Tang

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Multiple predator species alter prey behavior, population growth, and a trophic cascade in a model estuarine food web, PL Reynolds and JF Bruno

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Nondaily Deposition Of Striae In The Bay Scallop Argopecten Irradians (Concentricus) In The Laboratory, P Hollyman, Mark W. Luckenbach, and CA Richardson

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Oyster-mediated benthic-pelagic coupling modifies nitrogen pools and processes, AR Smyth, NR Geraldi, and MF Piehler

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Patterns and drivers of the demersal fish community of Chesapeake Bay, Andre Buchheister, Christopher F. Bonzek, James Gartland, and Robert J. Latour

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Penguin Biogeography Along the West Antarctic Peninsula Testing the Canyon Hypothesis with Palmer LTER Observations, O Schofield, H Ducklow, K Bernard, S Doney, D Patterson-Fraser, and Et al.