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Submissions from 2014

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Using biogeochemical data assimilation to assess the relative skill of multiple ecosystem models in the Mid-Atlantic Bight: effects of increasing the complexity of the planktonic food web, Y. Xiao and Marjorie A.M. Friedrichs

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Value of coastal habitats for exploited species: introduction to a theme set of articles, RD Seitz

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Winter and spring controls on the summer food web of the coastal West Antarctic Peninsula, Grace K. Saba, William R. Fraser, Vincent S. Saba, Richard A. Iannuzzi, Kaycee E. Coleman, Scott C. Doney, Hugh W. Ducklow, Douglas G. Martinson, Travis N. Miles, Donna L. Patterson-Fraser, Sharon E. Stammerjohn, and Deborah K. Steinberg

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Zooplankton carcasses and non-predatory mortality in freshwater and inland sea environments, KW Tang, MI Gladyshev, OP Dubovskaya, G Kirillin, and HP Grossart

Submissions from 2013

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Age, Growth, and Reproductive Biology of Cownose Rays in Chesapeake Bay, Robert A. Fisher, Garrett C. Call, and R. Dean Grubbs

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Age-specific responses to spring temperature in a migratory songbird: older females attempt more broods in warmer springs, L. Bulluck, S. Huber, C. Viverette, and C. Blem

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Biodiversity in a changing climate: a synthesis of current and projected trends in the US, MD Staudinger, SL Carter, MS Cross, NS Dubois, JE Duffy, and Et al.

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Broad-scale association between seagrass cover and juvenile blue crab density in Chesapeake Bay, Gina M. Ralph, RD Seitz, R J. Orth, Kathleen E. Knick, and Rom Lipcius

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Carbon fluxes and pelagic ecosystem dynamics near two western Antarctic Peninsula Adélie penguin colonies: an inverse model approach, Sevrine F. Sailley, Hugh W. Ducklow, Holly V. Moeller, William R. Fraser, Oscar M. Schofield, Deborah K. Steinberg, Lori M. Garzio, and Scott C. Doney

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Combining observations and numerical model results to improve estimates of hypoxic volume within the Chesapeake Bay, USA, A.J. Bever, Marjorie A.M. Friedrichs, Carl T. Friedrichs, M. E. Scully, and Lyon Lanerolle

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Comparative visual ecophysiology of mid-Atlantic temperate reef fishes, Andrij Z. Horodysky, Richard Brill, Kendyl C. Crawford, Elizabeth S. Seagroves, and Andrea K. Johnson

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Compensatory Growth of the Sandbar Shark in the Western North Atlantic Including the Gulf of Mexico, J. G. Romine, John A. Musick, and R. A. Johnson

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Conservation in the first internal transcribed spacer (ITS1) region of Hematodinium perezi (genotype III) from Callinectes sapidus, KMP Lohan, Hamish J. Small, Jeffrey D. Shields, AR Place, and Kimberly S. Reece

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Contribution of sea ice in the Southern Ocean to the cycling of volatile halogenated organic compounds, A Granfors, A Karlsson, E Mattsson, Walker O. Smith Jr., and K Abrahamsson

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Decline and Local Extinction of Caribbean Eusocial Shrimp, J. Emmett Duffy, Kenneth S. Macdonald, Kristin M. Hultgren, Tin Chi Solomon Chak, and Dustin Rubenstein

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Denitrification and nutrient assimilation on a restored oyster reef, M. Lisa Kellogg, Jeffery Cornwell, Michael S. Owens, and Kennedy Paynter

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Differential compartmentalization of memory B cells versus plasma cells in salmonid fish, CY Ma, JM Ye, and SL Kaattari

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Distribution and sources of organic matter in surface marine sediments across the North American Arctic margin, Miguel A. Goni, Alison E. O'Connor, Zou Zou Kyzyk, Mark B. Yunker, Charles Gobeil, and Robie W. MacDonald

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Distribution, prevalence, and genetic analysis of Panulirus argus virus 1 (PaV1) from the Caribbean Sea, JA Moss, D Behringer, Jeffrey D. Shields, A Baeza, A Aguilar-Perera, and et al.

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Does Presence of a Mid-Ocean Ridge Enhance Biomass and Biodiversity?, IG Priede, OA Bergstad, PI Miller, M Vecchione, A Gebruk, et al, TT Sutton, and et al

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Ecosystem effects of shell aggregations and cycling in coastal waters: an example of Chesapeake Bay oyster reefs, G G. Waldbusser, E N. Powell, and Roger L. Mann

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Effects of microalgal exudates and intact cells on subtropical marine zooplankton, NJ Silva, KW Tang, and RM Lopes

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Effects of seasonal hypoxia on macrobenthic production and function in the Rappahannock River, Virginia, USA, SK Sturdivant, RD Seitz, and RJ Diaz

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Envisioning a Marine Biodiversity Observation Network, JE Duffy, LA Amaral-Zettler, DG Fautin, G Paulay, TA Rynearson, and Et al.

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Extratropical storm inundation testbed: Intermodel comparisons in Scituate, Massachusetts, Changsheng Chen, Et al., and Harry V. Wang

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Fish Species Distribution in Seagrass Habitats of Chesapeake Bay are Structured by Abiotic and Biotic Factors, Jason J. Schaffler, Jacques van Montfrans, Cynthia M. Jones, and R J. Orth

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Fluid Driven by Tangential Velocity and Shear Stress: Mathematical Analysis, Numerical Experiment, and Implication to Surface Flow, H. S. Tang, L. Z. Zhang, J. P. -Y. Maa, H. Li, C.B. Jiang, and R. Hussain

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Genetic Population Structure of US Atlantic Coastal Striped Bass (Morone saxatilis), DT Gauthier, Corinne Audemard, JEL Carlsson, TL Darden, MR Denson, Kimberly S. Reece, and J Carlsson

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Habitat associations and dispersal of black sea bass from a mid-Atlantic Bight reef, Mary C. Fabrizio, John P. Manderson, and Jeffrey P. Pessutti

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Haplosporidium littoralis sp nov.: a crustacean pathogen within the Haplosporida (Cercozoa, Ascetosporea), GD Stentiford, KS Bateman, NA Stokes, and Ryan Carnegie

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Heritable Melanism and Parasitic Infection Both Result in Black-Spotted Mosquitofish, Lisa Horth, David Gauthier, and Wolfgang K. Vogelbein

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Improved method for quantifying the air-sea flux of volatile and semi-volatile organic carbon, EJ Hauser, RM Dickhut, R Falconer, and AS Wozniak

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Indication of Density-Dependent Changes in Growth and Maturity of the Barndoor Skate on Georges Bank, Karson Coutre, Todd Gedamke, David Rudders, William B. Driggers III, David M. Koester, and James A. Sulikowski

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Inferring tidal wetland stability from channel sediment fluxes: Observations and a conceptual model, NK Ganju, NJ Nidzieko, and Matthew L. Kirwan

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Internal versus external drivers of periodic hypoxia in a coastal plain tributary estuary: the York River, Virginia, SJ Lake, Mark Brush, Iris C. Anderson, and HI Kator

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Introduction to special section on The U.S. IOOS Coastal and Ocean Modeling Testbed, Richard A. Luettich Jr, L. Donelson Wright, Richard Signell, Carl T. Friedrichs, Marjorie A.M. Friedrichs, John Harding, Katja Fennel, Eoin Howlett, Sara Graves, Elizabeth Smith, Gary Crane, and Rebecca Baltes

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Krill biomass and aggregation structure in relation to tidal cycle in a penguin foraging region off the Western Antarctic Peninsula, KS Bernard and Deborah K. Steinberg

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Linking dynamics of transport timescale and variations of hypoxia in the Chesapeake Bay, Bo Hong and Jian Shen

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Longitudinal variability of size-fractionated N-2 fixation and DON release rates along 24.5 degrees N in the subtropical North Atlantic, Mar Benavides, Deborah A. Bronk, Nona S.R. Agawin, M. Dolores Perez-Hernandez, Alonso Hernandez-Guerra, and Javier Aristegui

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Microphytobenthos and benthic macroalgae determine sediment organic matter composition in shallow photic sediments, AK Hardison, Elizabeth A. Canuel, Iris C. Anderson, C. R. Tobias, B. Veuger, and M. N. Waters

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Microzooplankton grazing along the Western Antarctic Peninsula, LM Garzio, Deborah K. Steinberg, M Erickson, and HW Ducklow

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Migratory And Within-Estuary Behaviors Of Adult Summer Flounder (Paralichthys Dentatus) In A Lagoon System Of The Southern Mid-Atlantic Bight, Karen M. Capossela, Mary C. Fabrizio, and Richard Brill

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Modeling the Effect of Hypoxia on Macrobenthos Production in the Lower Rappahannock River, Chesapeake Bay, USA, Samuel Kersey Sturdivant, Mark Brush, and Robert J. Diaz

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Molecular and functional ecology of aquatic microbial symbionts, Hans-Peter Grossart, Lasse Riemann, and Kam W. Tang

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Multiple predator species alter prey behavior, population growth, and a trophic cascade in a model estuarine food web, PL Reynolds and JF Bruno

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Nondaily Deposition Of Striae In The Bay Scallop Argopecten Irradians (Concentricus) In The Laboratory, P Hollyman, Mark Luckenbach, and CA Richardson

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Oyster-mediated benthic-pelagic coupling modifies nitrogen pools and processes, AR Smyth, NR Geraldi, and MF Piehler

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Patterns and drivers of the demersal fish community of Chesapeake Bay, Andre Buchheister, Christopher F. Bonzek, James Gartland, and Robert J. Latour

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Penguin Biogeography Along the West Antarctic Peninsula Testing the Canyon Hypothesis with Palmer LTER Observations, O Schofield, H Ducklow, K Bernard, S Doney, D Patterson-Fraser, and Et al.

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Photochemical and microbial alteration of dissolved organic matter in temperate headwater streams associated with different land use, Yuehan Lu, James E. Bauer, Elizabeth A. Canuel, Youhei Yamashita, Randy Chambers, and Rudolf Jaffe

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Physiological effects of diet mixing on consumer fitness: a meta-analysis, JS Lefcheck, MA Whalen, TM Davenport, JP Stone, and JE Duffy

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Progress of regional oceanography study associated with western boundary current in the South China Sea, DongXiao Wang, QinYan Liu, Qiang Xie, ZhiGang He, Wei Zhuang, YeQiang Shu, XianJun Xiao, Bo Hong, XiangYu Wu, and DanDan Sui

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Projected Hg dietary exposure of 3 bird species nesting on a contaminated floodplain (South River, Virginia, USA), JC Wang and MC Newman

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Regression modeling of the North East Atlantic Spring Bloom suggests previously unrecognized biological roles for V and Mo, NJ Klein, AJ Beck, DA Hutchins, and SA Sanudo-Wilhelmy

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Return Of The Native: Historical Comparison Of Invasive And Indigenous Crab Populations Near The Mouth Of Delaware Bay, CM Schab, Susan Park, LA Waidner, and CE Epifanio

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Revision of the genus Centrophorus (Squaliformes: Centrophoridae): Part 1-Redescription of Centrophorus granulosus (Bloch & Schneider), a senior synonym of C-acus Garman and C-niaukang Teng, WT White, DA Ebert, GJP Naylor, HC Ho, P Clerkin, A Verissimo, and CF Cotton

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Seed burial in eelgrass Zostera marina: the role of infauna, NJ Blackburn and R J. Orth

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Simulated tsunami inundation for a range of Cascadia megathrust earthquake scenarios at Bandon, Oregon, USA, RC Witter, Yinglong J. Zhang, KL Wang, GR Priest, and C Goldfinger

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Sperm Swimming Speeds In The Eastern Oyster Crassostrea Virginica (Gmelin, 1791), Roger L. Mann and Mark Luckenbach

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Surface ocean pCO(2) seasonality and sea-air CO2 flux estimates for the North American east coast, SR Signorini, A Mannino, RG Najjar, Marjorie A.M. Friedrichs, and et al

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Temporal shifts in top-down vs. bottom-up control of epiphytic algae in a seagrass ecosystem, MA Whalen, JE Duffy, and JB Grace

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The Importance of Dissimilatory Nitrate Reduction to Ammonium (DNRA) in the Nitrogen Cycle of Coastal Ecosystems, AE Giblin, CR Tobias, BK Song, N Weston, and GT Banta

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The MAREDAT global database of high performance liquid chromatography marine pigment measurements, J. Peloquin and Walker O. Smith Jr.

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Tidal wind mapping from observations of a meteor radar chain in December 2011, You Yu, Weixing Wan, Baiqi Ning, Libo Liu, Zhengui Wang, LianHuan Hu, and Zhipeng Ren

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Trichodesmium-derived dissolved organic matter is a source of nitrogen capable of supporting the growth of toxic red tide Karenia brevis, Rachel E. Sipler, Deborah A. Bronk, Sybil P. Seitzinger, Ronald J. Lauck, Lora R. McGuinness, Gary J. Kirkpatrick, Cynthia A. Heil, Lee J. Kerkhof, and Oscar M. Schofield

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Using timescales to interpret dissolved oxygen distributions in the bottom waters of Chesapeake Bay, J Shen, B Hong, and AY Kuo

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US IOOS coastal and ocean modeling testbed: Inter-model evaluation of tides, waves, and hurricane surge in the Gulf of Mexico, PC Kerr, AS Donahue, JJ Westerliink, RA Luettich, LY Zheng, RH Weisberg, Y Huang, Harry V. Wang, Y Teng, David R. Forrest, and et al

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Visual acuity in pelagic fishes and mollusks, YL Gagnon, TT Sutton, and S Johnsen

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West Antarctic Peninsula: An Ice-Dependent Coastal Marine Ecosystem in Transition, Hugh Ducklow, William R. Fraser, Michael P. Meredith, Sharon E. Stammerjohn, Scott C. Doney, Douglas G. Martinson, Sevrine F. Sailley, Oscar M. Schofield, Deborah K. Steinberg, Hugh Venables, and Charles Amsler

Submissions from 2012

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Abstracts of Technical Papers, Presented at the 104th Annual Meeting, National Shellfisheries Association, Seattle, Washington, March 24–29, 2012, National Shellfisheries Association

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Abundance, Composition, and Sinking Rates of Fish Fecal Pellets in the Santa Barbara Channel, Grace K. Saba and Deborah K. Steinberg

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A fully coupled 3D wave-current interaction model on unstructured grids, Aron Roland, Yinglong J. Zhang, Harry V. Wang, Yanqiu Meng, Yi-Cheng Teng, Vladimir Maderich, Igor Brovchenko, Mathieu Dutour-Sikiric, and Ulrich Zanke

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A modeling study on the response of Chesapeake Bay to hurricane events of Floyd and Isabel, KH Cho, Harry V. Wang, Jian Shen, A Valle-Levinson, and YC Teng

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Assimilatory nitrate utilization by bacteria on the West Florida Shelf as determined by stable isotope probing and functional microarray analysis, B Wawrik, WB Boling, JD Van Nostrand, JP Xie, JZ Zhou, and DA Bronk

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Biotic dispersal in eelgrass Zostera marina, Sarah E. Sumoski and R J. Orth

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Bioturbation in a Declining Oxygen Environment, in situ Observations from Wormcam, S. Kersey Sturdivant, Robert J. Diaz, and George R. Cutter

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Changes in biodiversity and environmental stressors influence community structure of an experimental eelgrass Zostera marina system, Rachael E. Blake and J. Emmett Duffy

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Characterization and ecological implication of eelgrass life history strategies near the species' southern limit in the western North Atlantic, Jessie C. Jarvis, Ken Moore, and W. Judson Kenworthy

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Chlorophyll a in Antarctic sea ice from historical ice core data, KM Meiners, M Vancoppenolle, S Thanassekos, GS Dieckmann, DN Thomas, .. .., Walker O. Smith Jr., and et al

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Ciliate epibionts associated with crustacean zooplankton in German lakes: distribution, motility, and bacterivory, Samantha L. Bickel, Kam W. Tang, and Hans-Peter Grossart

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Circle Hooks In Commercial, Recreational, And Artisanal Fisheries: Research Status And Needs For Improved Conservation And Management, JE Serafy, SJ Cooke, GA Diaz, John Graves, and et al

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Comparison of Crassostrea virginica Gmelin (Eastern Oyster) Recruitment on Constructed Reefs and Adjacent Natural Oyster Bars over Decadal Time Scales, Juliana Harding, Melissa Southworth, Roger L. Mann, and James Wesson

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Detecting the Influence of Initial Pioneers on Succession at Deep-Sea Vents, Lauren S. Mullineaux, Nadine Le Bris, Susan W. Mills, Pauline Henri, Skylar R. Bayer, Richard G. Secrist, and Nam Siu

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Diseases of oysters Crassostrea ariakensis and C. virginica reared in ambient waters from the Choptank River, Maryland and the Indian River Lagoon, Florida, CF Dungan, Ryan Carnegie, KM Hill, CB McCollough, SE Laramore, CJ Kelly, NA Stokes, and J Scarpa

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Disease will limit future food supply from the global crustacean fishery and aquaculture sectors, GD Stentiford, DM Neil, EJ Peeler, Jeffrey D. Shields, and Hamish J. Small

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Distribution and Habitat Associations of Billfish and Swordfish Larvae across Mesoscale Features in the Gulf of Mexico, Jay R. Rooker, Jeff R. Simms, R. J. David Wells, Scott A. Holt, Joan Holt, John Graves, and Nathan B. Furey

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Dysbiosis In Epizootic Shell Disease Of The American Lobster (Homarus Americanus), NJ Meres, CC Ajuzie, M Sikaroodi, M Vemulapalli, Jeffrey D. Shields, and PM Gillevet

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Ecosystem metabolism in shallow coastal lagoons: patterns and partitioning of planktonic, benthic, and integrated community rates, Juliette C. P. Giordano, Mark Brush, and Iris C. Anderson

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Eelgrass recovery in the coastal bays of the Virginia Coast Reserve, USA, R J. Orth and Karen J. McGlathery

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Eelgrass restoration by seed maintains genetic diversity: case study from a coastal bay system, Laura K. Reynolds, Michelle Waycott, Karen J. McGlathery, and R J. Orth

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Eelgrass survival in two contrasting systems: role of turbidity and summer water temperatures, Ken Moore, Erin C. Shields, David B. Parrish, and R J. Orth

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Effects of Trophic Skewing of Species Richness onEcosystem Functioning in a Diverse Marine Community, Pamela L. Reynolds and John F. Bruno

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Evaluating the Current Status of American Shad Stocks in Three Virginia Rivers, Robert J. Latour, Eric J. Hilton, Patrick D. Lynch, Troy D. Tuckey, Brian Watkins, and John E. Olney

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Exotic macroalga Gracilaria vermiculophylla provides superior nursery habitat for native blue crab in Chesapeake Bay, Cora Ann Johnston and Rom Lipcius

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Genetic diversity of the Caribbean spiny lobster virus, Panulirus argus virus 1 (PaV1), and the discovery of PaV1 in lobster postlarvae, JA Moss, MJ Butler, DC Behringer, and Jeffrey D. Shields

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Genetic structure of Eurasian badgers Meles meles (Carnivora: Mustelidae) and the colonization history of Ireland, DB O'Meara, CJ Edwards, DP Sleeman, TF Cross, MJ Statham, JR McDowell, and Et al.

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Global patterns in the impact of marine herbivores on benthic primary producers, Alistair G.B. Poore, Alexandra H. Campbell, Ross Coleman, Graham J. Edgar, Veijo Jormalainen, Pamela L. Reynolds, Erik E. Sotka, John J. Stachowicz, Richard Taylor, Mathew A. Vanderklift, and J. Emmett Duffy

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Global Trophic Position Comparison of Two Dominant Mesopelagic Fish Families (Myctophidae, Stomiidae) Using Amino Acid Nitrogen Isotopic Analyses, C. Anela Choy and Tracey T. Sutton

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Histological Assessment Of The Lobster (Homarus Americanus) In The "100 Lobsters" Project, Jeffrey D. Shields, Kersten N. Wheeler, and JA Moss

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Historical ecology with real numbers: past and present extent and biomass of an imperilled estuarine habitat, PSEZ Ermgassen, MD Spalding, B Blake, LD Coen, B Dumbauld, Mark Luckenbach, and Et al.